Sinorhizobium fredii str. NXT3

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Sinorhizobium

Description

Sinorhizobium fredii str. NXT3 is a mesophilic, aerobic bacterium characterized by its Gram-negative bacilli morphology. This strain exhibits motility, facilitated by the presence of flagella, which enhances its ability to navigate its environment. Notably, it possesses two replicons in its genome, indicating a complex genetic architecture that may contribute to its adaptability and functionality in various conditions. The complete genomic information for this strain is accessible through the accession numbers NZ_CP024307.1 and NZ_CP024308.1. The unique combination of traits exhibited by Sinorhizobium fredii str. NXT3 suggests a specialization for environments where moderate temperatures and aerobic conditions prevail. Its motility may play a crucial role in its interactions with plant hosts, particularly in the context of symbiotic relationships. This capability highlights the potential ecological significance of this strain in promoting plant growth and soil health, thereby contributing to sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusSinorhizobium
SpeciesSinorhizobium fredii
StrainNXT3

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Sinorhizobium fredii str. NXT3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
Habitatroot nodules
Biotic relationshipNot Available
Host(s)Lablab purpureus, Parasponia andersonii, Lotus japonicus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinorhizobium fredii strain NXT3 chromosome, complete genome.

Gene Summary

Adenine Count

733844 bp

Thymine Count

737373 bp

Guanine Count

1242970 bp

Cytosine Count

1252818 bp

Genome Length

3967005 bp

Protein-coding Genes

3722 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type b 50s ribosomal protein l36NXT3_RS16905Not AvailablePositive3436742 - 34368674979.26
hypothetical proteinNXT3_RS16910Not AvailablePositive3436963 - 343756222114.7
alpha/beta fold hydrolaseNXT3_RS16915Not AvailablePositive3437608 - 343865437765.6
pyruvate kinaseNXT3_RS16920Not AvailableNegative3438621 - 344006051369.2
50s ribosomal protein l21NXT3_RS16925Not AvailableNegative3440060 - 344043113810.1
n-formylglutamate amidohydrolaseNXT3_RS16930Not AvailablePositive3440731 - 344152529069.7
duf1244 domain-containing proteinNXT3_RS16935Not AvailablePositive3441542 - 344184711838.8
duf2312 domain-containing proteinNXT3_RS16940Not AvailablePositive3442008 - 344227410008.9
duf882 domain-containing proteinNXT3_RS16945Not AvailableNegative3442352 - 344419064343.8
sigma-54-dependent transcriptional regulatorNXT3_RS16950Not AvailableNegative3444371 - 344591255961.5

Displaying genes 3341 – 3350 of 4193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.