Sinorhizobium fredii str. NXT3

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Sinorhizobium

Description

Sinorhizobium fredii str. NXT3 is a mesophilic, aerobic bacterium characterized by its Gram-negative bacilli morphology. This strain exhibits motility, facilitated by the presence of flagella, which enhances its ability to navigate its environment. Notably, it possesses two replicons in its genome, indicating a complex genetic architecture that may contribute to its adaptability and functionality in various conditions. The complete genomic information for this strain is accessible through the accession numbers NZ_CP024307.1 and NZ_CP024308.1. The unique combination of traits exhibited by Sinorhizobium fredii str. NXT3 suggests a specialization for environments where moderate temperatures and aerobic conditions prevail. Its motility may play a crucial role in its interactions with plant hosts, particularly in the context of symbiotic relationships. This capability highlights the potential ecological significance of this strain in promoting plant growth and soil health, thereby contributing to sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusSinorhizobium
SpeciesSinorhizobium fredii
StrainNXT3

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Sinorhizobium fredii str. NXT3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
Habitatroot nodules
Biotic relationshipNot Available
Host(s)Lablab purpureus, Parasponia andersonii, Lotus japonicus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinorhizobium fredii strain NXT3 chromosome, complete genome.

Gene Summary

Adenine Count

733844 bp

Thymine Count

737373 bp

Guanine Count

1242970 bp

Cytosine Count

1252818 bp

Genome Length

3967005 bp

Protein-coding Genes

3722 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad-dependent epimerase/dehydratase family proteinNXT3_RS16280Not AvailableNegative3307230 - 330833640244.0
mdr/zinc-dependent alcohol dehydrogenase-like family proteinNXT3_RS16285Not AvailablePositive3308683 - 330967535890.2
gfo/idh/moca family proteinNXT3_RS16290Not AvailablePositive3309668 - 331069336863.0
hypothetical proteinNXT3_RS16295Not AvailableNegative3310703 - 331246063500.7
inositol-3-phosphate synthaseNXT3_RS16300Not AvailablePositive3312603 - 331370640133.9
histidine phosphatase family proteinNXT3_RS16305Not AvailablePositive3313703 - 331430221244.1
beta-xylosidaseNXT3_RS16310Not AvailablePositive3314363 - 331534037201.9
coenzyme f420 hydrogenase/dehydrogenase, beta subunit c-terminal domainNXT3_RS16315Not AvailableNegative3315280 - 331670453024.2
polysaccharide pyruvyl transferase family proteinNXT3_RS16320Not AvailableNegative3316691 - 331776439821.3
group iii truncated hemoglobinNXT3_RS16325Not AvailableNegative3317921 - 331838216801.1

Displaying genes 3211 – 3220 of 4193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.