Sinorhizobium fredii str. NXT3

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Sinorhizobium

Description

Sinorhizobium fredii str. NXT3 is a mesophilic, aerobic bacterium characterized by its Gram-negative bacilli morphology. This strain exhibits motility, facilitated by the presence of flagella, which enhances its ability to navigate its environment. Notably, it possesses two replicons in its genome, indicating a complex genetic architecture that may contribute to its adaptability and functionality in various conditions. The complete genomic information for this strain is accessible through the accession numbers NZ_CP024307.1 and NZ_CP024308.1. The unique combination of traits exhibited by Sinorhizobium fredii str. NXT3 suggests a specialization for environments where moderate temperatures and aerobic conditions prevail. Its motility may play a crucial role in its interactions with plant hosts, particularly in the context of symbiotic relationships. This capability highlights the potential ecological significance of this strain in promoting plant growth and soil health, thereby contributing to sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusSinorhizobium
SpeciesSinorhizobium fredii
StrainNXT3

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Sinorhizobium fredii str. NXT3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
Habitatroot nodules
Biotic relationshipNot Available
Host(s)Lablab purpureus, Parasponia andersonii, Lotus japonicus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinorhizobium fredii strain NXT3 chromosome, complete genome.

Gene Summary

Adenine Count

733844 bp

Thymine Count

737373 bp

Guanine Count

1242970 bp

Cytosine Count

1252818 bp

Genome Length

3967005 bp

Protein-coding Genes

3722 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cupin domain-containing proteinNXT3_RS32305Not AvailableNegative1759925 - 176022710981.0
50s ribosomal protein l21NXT3_RS08590Not AvailableNegative1760330 - 176169748786.7
hydroxypyruvate isomerase family proteinNXT3_RS08595Not AvailableNegative1761694 - 176252429666.2
ldh family oxidoreductaseNXT3_RS08600Not AvailableNegative1762524 - 176360037996.0
tripartite tricarboxylate transporter permeaseNXT3_RS08605Not AvailableNegative1763639 - 176515052914.5
tripartite tricarboxylate transporter tctb family proteinNXT3_RS08610Not AvailableNegative1765224 - 176572117670.0
bug family tripartite tricarboxylate transporter substrate binding proteinNXT3_RS08615Not AvailableNegative1765754 - 176673734234.4
isocitrate/isopropylmalate dehydrogenase family proteinNXT3_RS08620Not AvailableNegative1766858 - 176794938885.7
gntr family transcriptional regulatorNXT3_RS08625Not AvailablePositive1768190 - 176907433979.0
transcriptional regulatorNXT3_RS08635Not AvailableNegative1769715 - 177002311319.7

Displaying genes 1731 – 1740 of 4193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.