Bradyrhizobium sp.

RodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Bradyrhizobium

Description

Bradyrhizobium sp. is a Gram-negative, rod-shaped bacterium that exhibits motility facilitated by true flagella. This microbe is strictly aerobic, thriving in environments such as pasture soil and general soil habitats. It is nonsporulating, meaning it does not form spores as part of its reproductive cycle. Notably, Bradyrhizobium sp. contains two replicons within its genome, which is accessible through the sequence data with accessions NZ_LN901633.1 and NZ_LN907826.1. The presence of true flagella suggests an adaptation to its soil environment, enabling the bacterium to navigate through the soil matrix in search of nutrients or symbiotic partners. The aerobic nature of Bradyrhizobium sp. indicates its reliance on oxygen for metabolic processes, which is critical for its survival and function in the soil ecosystem. Additionally, the habitat preference of Bradyrhizobium sp. highlights its potential role in soil health and fertility, possibly contributing to nitrogen fixation in association with plant roots. This relationship underscores its ecological importance, particularly in agricultural settings where soil nitrogen levels are essential for crop growth and sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusBradyrhizobium
SpeciesBradyrhizobium sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Bradyrhizobium sp.
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatPasture soil; soil
Biotic relationshipNot Available
Host(s)Viridiplantae, Glycine max, Ornithopus
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bradyrhizobium sp. isolate BF49_genome1 chromosome I.

Gene Summary

Adenine Count

1370077 bp

Thymine Count

1364363 bp

Guanine Count

2406457 bp

Cytosine Count

2406787 bp

Genome Length

7547693 bp

Protein-coding Genes

7294 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoribosylanthranilate isomeraseBN2626_RS00465Q89WE6Negative109509 - 11018023737.7
lipopolysaccharide assembly protein lapa domain-containing proteinBN2626_RS00470Not AvailableNegative110262 - 11065414192.6
integration host factor subunit betaBN2626_RS00475Q89WE8Negative110726 - 11103111399.6
signal peptide peptidase sppaBN2626_RS00480Q55682Negative111204 - 11218434768.1
30s ribosomal protein s1BN2626_RS00485Q6NDP1Negative112463 - 11416962872.0
(d)cmp kinaseBN2626_RS00490Q89WF1Negative114437 - 11507522681.1
3-phosphoshikimate 1-carboxyvinyltransferaseBN2626_RS00495Q89WF2Negative115072 - 11646948952.1
tigr02300 family proteinBN2626_RS00500Not AvailablePositive116582 - 11699214432.1
Trna-alaNot AvailableNot AvailablePositive117059 - 117134Not Available
giy-yig nuclease family proteinBN2626_RS00510Not AvailablePositive117270 - 1175129545.49

Displaying genes 121 – 130 of 15944 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

422 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000333(1R,4R)-bornane-2,5-dioneC10H14O2Chemical structure of (1R,4R)-bornane-2,5-dioneNot available
Average166.22Da
Monoisotopic166.0993797Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da

Displaying 1–10 of 422 metabolites

Health Effects

No health effects information available for this bacterium.