Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Botryococcus braunii, Glycine max, Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Terminase large subunit | DCW88_03590 | Not Available | Negative | 647623 - 649608 | 74388.7 |
| Hypothetical protein | DCW88_03595 | Not Available | Negative | 649605 - 650210 | 22135.2 |
| Hypothetical protein | DCW88_03600 | Not Available | Negative | 650565 - 651341 | 29352.1 |
| Dna primase | DCW88_03605 | Not Available | Negative | 651766 - 653586 | 68196.0 |
| Hypothetical protein | DCW88_03610 | Not Available | Negative | 653662 - 654894 | 45186.1 |
| C-5 cytosine-specific dna methylase | DCW88_03615 | Not Available | Negative | 654927 - 657164 | 79669.7 |
| Hypothetical protein | DCW88_03620 | Not Available | Negative | 657345 - 657713 | 13800.5 |
| Hypothetical protein | DCW88_03625 | Not Available | Negative | 657713 - 658291 | 21236.6 |
| Hypothetical protein | DCW88_03630 | Not Available | Negative | 658288 - 658638 | 13526.9 |
| Dna methylase | DCW88_03635 | Not Available | Negative | 658635 - 661244 | 98798.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

