Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Botryococcus braunii, Glycine max, Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Baseplate assembly protein v | DCW88_03490 | Not Available | Negative | 633021 - 633509 | 16771.9 |
| Tail protein | DCW88_03495 | Not Available | Negative | 633506 - 634570 | 38209.9 |
| Hypothetical protein | DCW88_03500 | Not Available | Negative | 634570 - 635193 | 21399.4 |
| Putative tail/dna circulation protein | DCW88_03505 | Not Available | Negative | 635193 - 635651 | 16662.9 |
| Hypothetical protein | DCW88_03510 | Not Available | Positive | 635730 - 636248 | 18643.1 |
| Tail tape measure protein | DCW88_03515 | Not Available | Negative | 636257 - 638218 | 70247.2 |
| Putative minor tail protein | DCW88_03520 | Not Available | Negative | 638228 - 638782 | 20563.9 |
| Hypothetical protein | DCW88_03525 | Not Available | Negative | 638895 - 639215 | 12124.5 |
| Putative tail tube protein | DCW88_03530 | Not Available | Negative | 639225 - 639596 | 13255.4 |
| Tail sheath protein | DCW88_03535 | Not Available | Negative | 639645 - 641123 | 51936.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

