Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Botryococcus braunii, Glycine max, Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | DCW88_03440 | Not Available | Negative | 626572 - 626814 | 9280.27 |
| Hypothetical protein | DCW88_03445 | Not Available | Negative | 626850 - 627338 | 17527.7 |
| Hypothetical protein | DCW88_03450 | Not Available | Negative | 627343 - 627506 | 5352.41 |
| Hypothetical protein | DCW88_03455 | Not Available | Negative | 627647 - 627830 | 6259.66 |
| Baseplate hub subunit with lysozyme motif | DCW88_03460 | Not Available | Negative | 627854 - 628531 | 24262.4 |
| Tail assembly chaperone | DCW88_03465 | Not Available | Negative | 628950 - 629498 | 19056.2 |
| Tail fiber domain-containing protein | DCW88_03470 | Not Available | Negative | 629502 - 630710 | 41220.8 |
| Tail protein | DCW88_03475 | Not Available | Negative | 630723 - 631442 | 25547.3 |
| Baseplate j family protein | DCW88_03480 | Not Available | Negative | 631417 - 632502 | 37852.9 |
| Putative tail protein | DCW88_03485 | Not Available | Negative | 632474 - 633010 | 19919.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

