Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Botryococcus braunii, Glycine max, Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acr family transporter | DCW88_25500 | Not Available | Positive | 4588556 - 4588953 | 14427.0 |
| acr family transporter | DCW88_25505 | Not Available | Positive | 4589126 - 4589447 | 11539.0 |
| acr family transporter | DCW88_25510 | Not Available | Positive | 4589640 - 4591659 | 73446.6 |
| hypothetical protein | DCW88_25515 | Not Available | Positive | 4591666 - 4591845 | 6451.05 |
| gntr family transcriptional regulator | DCW88_25520 | Not Available | Positive | 4591848 - 4592564 | 26157.3 |
| aspartate ammonia-lyase | DCW88_25525 | Not Available | Negative | 4592533 - 4593650 | 39311.4 |
| o-acetylserine/cysteine exporter | DCW88_25530 | Not Available | Positive | 4593651 - 4594132 | 16693.0 |
| atp-binding protein | DCW88_25535 | Not Available | Positive | 4594409 - 4595893 | 53981.7 |
| hypothetical protein | DCW88_25540 | Not Available | Negative | 4595894 - 4596415 | 20028.3 |
| hypothetical protein | DCW88_25545 | Not Available | Negative | 4596520 - 4596729 | 7872.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

