Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Botryococcus braunii, Glycine max, Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | DCW88_19295 | Not Available | Positive | 3490494 - 3491192 | 24347.1 |
| hypothetical protein | DCW88_19300 | Not Available | Negative | 3491193 - 3491561 | 13453.7 |
| ppic-type peptidyl-prolyl cis-trans isomerase | DCW88_19305 | Not Available | Negative | 3491571 - 3491928 | 12603.7 |
| ppic-type peptidyl-prolyl cis-trans isomerase | DCW88_19310 | Not Available | Negative | 3492199 - 3492715 | 18426.9 |
| disulfide bond formation protein dsba | DCW88_19315 | Not Available | Negative | 3492712 - 3492886 | 6161.36 |
| disulfide bond formation protein dsba | DCW88_19320 | Not Available | Negative | 3493004 - 3493396 | 14449.4 |
| cation transporter | DCW88_19325 | Not Available | Negative | 3493543 - 3494081 | 18567.7 |
| hypothetical protein | DCW88_19330 | Not Available | Positive | 3494082 - 3494539 | 17209.5 |
| exodeoxyribonuclease iii | DCW88_19335 | Not Available | Positive | 3494698 - 3495501 | 30581.8 |
| cyclic nucleotide-binding domain-containing protein | DCW88_19340 | Not Available | Negative | 3495534 - 3495989 | 16507.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

