Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Botryococcus braunii, Glycine max, Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate kinase | DCW88_19245 | Not Available | Negative | 3481304 - 3482230 | 32851.5 |
| orotate phosphoribosyltransferase | DCW88_19250 | Not Available | Negative | 3482329 - 3483027 | 25570.9 |
| dihydroorotase | DCW88_19255 | Not Available | Negative | 3483175 - 3484212 | 37949.6 |
| proline racemase | DCW88_19260 | Not Available | Negative | 3484325 - 3485362 | 36934.6 |
| esterase | DCW88_19265 | Not Available | Negative | 3485487 - 3486801 | 47393.4 |
| hypothetical protein | DCW88_19270 | Not Available | Negative | 3486802 - 3487006 | 6966.78 |
| coa-binding protein | DCW88_19275 | Not Available | Positive | 3487903 - 3488337 | 16049.4 |
| o-acetylhomoserine aminocarboxypropyltransferase | DCW88_19280 | Not Available | Positive | 3488411 - 3489694 | 45461.9 |
| cupin domain-containing protein | DCW88_19285 | Not Available | Positive | 3489710 - 3490054 | 12852.0 |
| arsr family transcriptional regulator | DCW88_19290 | Not Available | Negative | 3490078 - 3490392 | 11444.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

