Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Botryococcus braunii, Glycine max, Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | DCW88_18840 | Not Available | Negative | 3409260 - 3409616 | 13063.9 |
| hypothetical protein | DCW88_18845 | Not Available | Positive | 3409788 - 3410006 | 8126.64 |
| hypothetical protein | DCW88_18850 | Not Available | Positive | 3410053 - 3410457 | 14133.2 |
| hypothetical protein | DCW88_18855 | Not Available | Positive | 3410683 - 3411469 | 28065.4 |
| sugar abc transporter permease | DCW88_18860 | Not Available | Positive | 3411470 - 3411677 | 7698.62 |
| sugar abc transporter permease | DCW88_18865 | Not Available | Positive | 3411882 - 3412163 | 9853.5 |
| sugar abc transporter atp-binding protein | DCW88_18870 | Not Available | Positive | 3412196 - 3412327 | 4640.64 |
| sugar abc transporter atp-binding protein | DCW88_18875 | Not Available | Positive | 3412518 - 3413451 | 34279.6 |
| sugar kinase | DCW88_18880 | Not Available | Positive | 3413472 - 3414431 | 34325.1 |
| aminopeptidase | DCW88_18885 | Not Available | Positive | 3414575 - 3415633 | 36662.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

