Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Botryococcus braunii, Glycine max, Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter permease | DCW88_18205 | Not Available | Positive | 3298402 - 3299409 | 36579.3 |
| dipeptide abc transporter permease dppc | DCW88_18210 | Not Available | Positive | 3299406 - 3300308 | 32185.2 |
| abc transporter atp-binding protein | DCW88_18220 | Not Available | Positive | 3301241 - 3302086 | 30879.6 |
| mannitol dehydrogenase | DCW88_18225 | Not Available | Negative | 3302138 - 3303607 | 54263.0 |
| gntr family transcriptional regulator | DCW88_18230 | Not Available | Negative | 3303712 - 3304386 | 24583.6 |
| hypothetical protein | DCW88_18235 | Not Available | Positive | 3304727 - 3305830 | 40177.4 |
| hypothetical protein | DCW88_18240 | Not Available | Positive | 3305833 - 3306948 | 39955.9 |
| acetate/propionate family kinase | DCW88_18245 | Not Available | Positive | 3307110 - 3308297 | 43202.5 |
| phosphoketolase | DCW88_18250 | Not Available | Positive | 3308417 - 3310843 | 90384.3 |
| hypothetical protein | DCW88_18255 | Not Available | Negative | 3311782 - 3311979 | 7524.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

