Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Botryococcus braunii, Glycine max, Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell envelope biogenesis protein ompa | DCW88_17615 | Not Available | Negative | 3195371 - 3196707 | 49664.1 |
| apolipoprotein n-acyltransferase | DCW88_17620 | Not Available | Positive | 3196708 - 3197719 | 36395.6 |
| xre family transcriptional regulator | DCW88_17625 | Not Available | Positive | 3197852 - 3198271 | 15168.2 |
| methionine adenosyltransferase | DCW88_17630 | Not Available | Positive | 3198463 - 3199725 | 45301.8 |
| trna (guanosine(46)-n7)-methyltransferase trmb | DCW88_17635 | Not Available | Positive | 3199895 - 3200593 | 26836.9 |
| ribokinase | DCW88_17640 | Not Available | Negative | 3200984 - 3201202 | 7327.68 |
| lytic transglycosylase domain-containing protein | DCW88_17645 | Not Available | Negative | 3201212 - 3202366 | 41030.1 |
| hypothetical protein | DCW88_17650 | Not Available | Negative | 3202959 - 3203732 | 28414.9 |
| is481 family transposase | DCW88_17660 | Not Available | Positive | 3204568 - 3205146 | 22636.4 |
| hypothetical protein | DCW88_17665 | Not Available | Positive | 3205539 - 3205985 | 16968.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

