Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Botryococcus braunii, Glycine max, Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antirestriction protein ardc | DCW88_16765 | Not Available | Negative | 3041979 - 3042932 | 34886.3 |
| hypothetical protein | DCW88_16770 | Not Available | Negative | 3043203 - 3043394 | 7236.49 |
| hypothetical protein | DCW88_16775 | Not Available | Positive | 3043469 - 3043750 | 9902.83 |
| pin domain-containing protein | DCW88_16780 | Not Available | Negative | 3043951 - 3044526 | 21275.7 |
| excisionase | DCW88_16785 | Not Available | Negative | 3044516 - 3044962 | 16303.7 |
| integrase | DCW88_16790 | Not Available | Negative | 3045091 - 3045735 | 22936.4 |
| chemotaxis protein | DCW88_16795 | Not Available | Negative | 3045736 - 3046045 | 10854.6 |
| chemotaxis protein | DCW88_16800 | Not Available | Negative | 3046287 - 3047591 | 47128.8 |
| hypothetical protein | DCW88_16805 | Not Available | Positive | 3047855 - 3048445 | 21731.2 |
| glycerol 3-phosphate abc transporter | DCW88_16815 | Not Available | Positive | 3049307 - 3050650 | 49628.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

