Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Botryococcus braunii, Glycine max, Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCW88_16000 | Not Available | Negative | 2898319 - 2898663 | 12882.5 |
| hypothetical protein | DCW88_16005 | Not Available | Negative | 2898660 - 2899709 | 37516.8 |
| hypothetical protein | DCW88_16010 | Not Available | Negative | 2899792 - 2900064 | 10250.1 |
| hypothetical protein | DCW88_16015 | Not Available | Negative | 2900061 - 2900264 | 7598.29 |
| hypothetical protein | DCW88_16020 | Not Available | Negative | 2900261 - 2900464 | 7662.29 |
| cobaltochelatase subunit cobn | DCW88_16025 | Not Available | Positive | 2900580 - 2901804 | 43729.0 |
| precorrin-3b synthase | DCW88_16030 | Not Available | Positive | 2901804 - 2903156 | 46435.1 |
| precorrin-8x methylmutase | DCW88_16035 | Not Available | Positive | 2903153 - 2903785 | 22013.6 |
| precorrin-2 c(20)-methyltransferase | DCW88_16040 | Not Available | Positive | 2903782 - 2903950 | 5770.12 |
| l-rhamnose mutarotase | DCW88_16045 | Not Available | Negative | 2903951 - 2904107 | 6165.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

