Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Botryococcus braunii, Glycine max, Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | DCW88_15640 | Not Available | Negative | 2828275 - 2828955 | 24936.2 |
| pp_03110 | DCW88_15645 | Not Available | Negative | 2829120 - 2829461 | Not Available |
| pyrroline-5-carboxylate reductase | DCW88_15650 | Not Available | Negative | 2829473 - 2830291 | 27651.5 |
| hypothetical protein | DCW88_15655 | Not Available | Negative | 2830293 - 2830793 | 18750.1 |
| hypothetical protein | DCW88_15660 | Not Available | Negative | 2831217 - 2831480 | 9712.35 |
| prolipoprotein diacylglyceryl transferase | DCW88_15665 | Not Available | Positive | 2831759 - 2832601 | 30348.8 |
| tetr family transcriptional regulator | DCW88_15670 | Not Available | Positive | 2832618 - 2833666 | 37840.5 |
| mfs transporter | DCW88_15675 | Not Available | Negative | 2833667 - 2834394 | 26729.5 |
| marr family transcriptional regulator | DCW88_15680 | Not Available | Negative | 2834547 - 2835002 | 16982.2 |
| replicative dna helicase | DCW88_15685 | Not Available | Positive | 2835312 - 2836808 | 54978.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

