Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Botryococcus braunii, Glycine max, Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-mannonate oxidoreductase | DCW88_15535 | Not Available | Negative | 2814071 - 2815204 | 41812.2 |
| dehydrogenase | DCW88_15540 | Not Available | Negative | 2815201 - 2816211 | 35796.2 |
| amidohydrolase | DCW88_15545 | Not Available | Negative | 2816215 - 2817036 | 29971.2 |
| pyridoxal 4-dehydrogenase | DCW88_15550 | Not Available | Negative | 2817041 - 2817326 | 10090.9 |
| is481 family transposase | DCW88_15555 | Not Available | Negative | 2817327 - 2817941 | 23579.5 |
| hypothetical protein | DCW88_15560 | Not Available | Negative | 2818274 - 2818471 | 7022.55 |
| hypothetical protein | DCW88_15565 | Not Available | Negative | 2818671 - 2818970 | 11203.6 |
| hypothetical protein | DCW88_15570 | Not Available | Positive | 2819142 - 2819678 | 20219.1 |
| hypothetical protein | DCW88_15575 | Not Available | Positive | 2819679 - 2819978 | 11581.7 |
| hypothetical protein | DCW88_15580 | Not Available | Negative | 2820000 - 2820458 | 16885.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

