Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Botryococcus braunii, Glycine max, Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCW88_15325 | Not Available | Positive | 2776548 - 2777087 | 19315.3 |
| teichoic acid biosynthesis protein | DCW88_15330 | Not Available | Positive | 2777296 - 2777970 | 24636.0 |
| hypothetical protein | DCW88_15335 | Not Available | Positive | 2778085 - 2779857 | 63659.1 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | DCW88_15340 | Not Available | Positive | 2779935 - 2780834 | 30587.3 |
| preprotein translocase subunit secg | DCW88_15350 | Not Available | Negative | 2782262 - 2782720 | 14962.0 |
| triose-phosphate isomerase | DCW88_15355 | Not Available | Negative | 2782836 - 2783606 | 27043.3 |
| phospholipase | DCW88_15360 | Not Available | Negative | 2783820 - 2784701 | 31691.9 |
| dna topoisomerase iv subunit b | DCW88_15365 | Not Available | Positive | 2784927 - 2786964 | 74390.5 |
| dna replication protein | DCW88_15370 | Not Available | Negative | 2787025 - 2787447 | 15845.2 |
| transcriptional regulator | DCW88_15375 | Not Available | Negative | 2787925 - 2788353 | 15618.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

