Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Botryococcus braunii, Glycine max, Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 2710148 - 2710223 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 2710670 - 2710746 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 2710788 - 2710864 | Not Available |
| nadh-quinone oxidoreductase subunit a | DCW88_14970 | Not Available | Positive | 2711300 - 2711665 | 13787.2 |
| nadh-quinone oxidoreductase subunit b | DCW88_14975 | Not Available | Positive | 2711656 - 2712233 | 20856.3 |
| nadh-quinone oxidoreductase subunit c | DCW88_14980 | Not Available | Positive | 2712391 - 2712980 | 22576.7 |
| multi antimicrobial extrusion protein mate | DCW88_14985 | Not Available | Negative | 2712981 - 2713471 | 17825.5 |
| glucan biosynthesis protein c | DCW88_14990 | Not Available | Negative | 2713529 - 2714731 | 44823.7 |
| eama/rhat family transporter | DCW88_14995 | Not Available | Negative | 2714813 - 2715706 | 30917.2 |
| hypothetical protein | DCW88_15000 | Not Available | Negative | 2715842 - 2716019 | 6276.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

