Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Botryococcus braunii, Glycine max, Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | DCW88_14255 | Not Available | Negative | 2583646 - 2583978 | 12313.8 |
| hypothetical protein | DCW88_14260 | Not Available | Positive | 2584225 - 2585211 | 36364.7 |
| curlin | DCW88_14265 | Not Available | Negative | 2585258 - 2585683 | 14737.4 |
| hypothetical protein | DCW88_14270 | Not Available | Negative | 2585840 - 2586238 | 13547.2 |
| curlin | DCW88_14275 | Not Available | Negative | 2586299 - 2586736 | 14990.3 |
| cupin | DCW88_14280 | Not Available | Negative | 2586917 - 2587405 | 17545.6 |
| hypothetical protein | DCW88_14285 | Not Available | Negative | 2587586 - 2588851 | 45389.0 |
| hypothetical protein | DCW88_14290 | Not Available | Negative | 2588852 - 2589056 | 7663.04 |
| sigma-54-dependent fis family transcriptional regulator | DCW88_14300 | Not Available | Positive | 2591019 - 2592383 | 49966.0 |
| ba14k family protein | DCW88_14305 | Not Available | Negative | 2592511 - 2593014 | 18943.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

