Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Botryococcus braunii, Glycine max, Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase | DCW88_13620 | Not Available | Positive | 2477945 - 2479183 | 44408.5 |
| eama family transporter | DCW88_13625 | Not Available | Negative | 2479190 - 2479860 | 23036.9 |
| carboxylate--amine ligase | DCW88_13630 | Not Available | Negative | 2479861 - 2482060 | 79760.5 |
| acyl-coa thioesterase | DCW88_13635 | Not Available | Negative | 2482217 - 2482606 | 14363.4 |
| hypothetical protein | DCW88_13640 | Not Available | Positive | 2482781 - 2482975 | 7245.65 |
| glycosyl transferase family 1 | DCW88_13645 | Not Available | Negative | 2483015 - 2484826 | 66164.0 |
| hypothetical protein | DCW88_13650 | Not Available | Negative | 2484783 - 2484988 | 7672.11 |
| adenylate cyclase | DCW88_13655 | Not Available | Positive | 2485223 - 2485569 | 11985.3 |
| adenylate cyclase | DCW88_13660 | Not Available | Positive | 2485709 - 2486541 | 30228.2 |
| transcriptional regulator | DCW88_13665 | Not Available | Negative | 2486670 - 2486990 | 11508.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

