Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Botryococcus braunii, Glycine max, Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCW88_13370 | Not Available | Negative | 2431698 - 2433614 | 70957.6 |
| merr family transcriptional regulator | DCW88_13375 | Not Available | Positive | 2433624 - 2433730 | 4028.6 |
| divalent metal cation transporter | DCW88_13380 | Not Available | Negative | 2433960 - 2435285 | 46966.8 |
| hypothetical protein | DCW88_13385 | Not Available | Positive | 2435449 - 2436735 | 46545.7 |
| hypothetical protein | DCW88_13390 | Not Available | Negative | 2436810 - 2437280 | 16336.3 |
| hypothetical protein | DCW88_13395 | Not Available | Negative | 2437524 - 2438006 | 17037.3 |
| cadmium-translocating p-type atpase | DCW88_13400 | Not Available | Negative | 2438141 - 2440747 | 90212.0 |
| metal-binding protein | DCW88_13405 | Not Available | Negative | 2441007 - 2441462 | 15919.2 |
| cusa/czca family heavy metal efflux rnd transporter | DCW88_13410 | Not Available | Negative | 2441477 - 2442050 | 20347.9 |
| hypothetical protein | DCW88_13415 | Not Available | Negative | 2442051 - 2442824 | 28260.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

