Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Botryococcus braunii, Glycine max, Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCW88_13010 | Not Available | Negative | 2367622 - 2368452 | 31588.9 |
| duf2384 domain-containing protein | DCW88_13020 | Not Available | Positive | 2369276 - 2369626 | 12917.4 |
| hypothetical protein | DCW88_13025 | Not Available | Positive | 2369633 - 2370130 | 18180.6 |
| merr family dna-binding transcriptional regulator | DCW88_13030 | Not Available | Negative | 2370630 - 2371061 | 15864.4 |
| mfs transporter | DCW88_13035 | Not Available | Positive | 2371200 - 2372396 | 41214.1 |
| transcriptional regulator | DCW88_13045 | Not Available | Negative | 2373124 - 2373396 | 9724.71 |
| nucleotidyltransferase | DCW88_13050 | Not Available | Negative | 2373814 - 2374746 | 35712.4 |
| conjugal transfer protein trag | DCW88_13055 | Not Available | Negative | 2375353 - 2376132 | 28704.4 |
| aldehyde dehydrogenase | DCW88_13060 | Not Available | Negative | 2376133 - 2376790 | 23949.9 |
| glutamine synthetase | DCW88_13065 | Not Available | Negative | 2376809 - 2378176 | 50819.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

