Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Botryococcus braunii, Glycine max, Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inositol monophosphatase | DCW88_12905 | Not Available | Negative | 2354310 - 2354514 | 7603.09 |
| mbl fold metallo-hydrolase | DCW88_12910 | Not Available | Negative | 2354658 - 2355482 | 29246.8 |
| urease accessory protein ureg | DCW88_12915 | Not Available | Negative | 2355486 - 2356097 | 21533.9 |
| urease accessory protein uref | DCW88_12920 | Not Available | Negative | 2356251 - 2356883 | 21962.1 |
| urease accessory protein uree | DCW88_12925 | Not Available | Negative | 2356926 - 2357489 | 21173.2 |
| peroxiredoxin | DCW88_12930 | Not Available | Negative | 2357573 - 2358109 | 19856.5 |
| tigr02117 family protein | DCW88_12935 | Not Available | Negative | 2358265 - 2358933 | 24158.1 |
| urease subunit alpha | DCW88_12940 | Not Available | Negative | 2358946 - 2360655 | 60858.9 |
| urease operon accessory protein | DCW88_12945 | Not Available | Negative | 2360660 - 2361304 | 22886.9 |
| lysozyme inhibitor lpri family protein | DCW88_12950 | Not Available | Negative | 2361309 - 2361725 | 14859.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

