Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Botryococcus braunii, Glycine max, Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | DCW88_12325 | Not Available | Negative | 2255343 - 2255579 | 8317.83 |
| acyltransferase | DCW88_12330 | Not Available | Positive | 2255881 - 2256978 | 40579.6 |
| hypothetical protein | DCW88_12335 | Not Available | Negative | 2257001 - 2257243 | 8544.31 |
| hypothetical protein | DCW88_12340 | Not Available | Negative | 2257340 - 2257627 | 10961.3 |
| hypothetical protein | DCW88_12345 | Not Available | Negative | 2258359 - 2258574 | 7736.21 |
| 30s ribosomal protein s21 | DCW88_12350 | Not Available | Negative | 2258609 - 2258845 | 9456.69 |
| cold-shock protein | DCW88_12355 | Not Available | Negative | 2258874 - 2259164 | 10639.6 |
| cold-shock protein | DCW88_12360 | Not Available | Negative | 2259275 - 2259484 | 7491.73 |
| 4,5-dihydroxyphthalate dehydrogenase | DCW88_12365 | Not Available | Negative | 2260239 - 2261474 | 46287.8 |
| sugar phosphate isomerase/epimerase | DCW88_12370 | Not Available | Negative | 2261494 - 2262315 | 29544.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

