Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Botryococcus braunii, Glycine max, Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCW88_11855 | Not Available | Negative | 2161680 - 2162382 | 22768.9 |
| acyltransferase | DCW88_11865 | Not Available | Negative | 2163646 - 2163764 | 4257.31 |
| hypothetical protein | DCW88_11870 | Not Available | Negative | 2163948 - 2165276 | 48778.1 |
| acyltransferase | DCW88_11875 | Not Available | Negative | 2165323 - 2166444 | 41149.0 |
| glycosyl transferase family 1 | DCW88_11880 | Not Available | Positive | 2166761 - 2167984 | 45964.0 |
| lipopolysaccharide biosynthesis protein | DCW88_11885 | Not Available | Positive | 2168058 - 2169530 | 52881.2 |
| glycosyltransferase family 2 protein | DCW88_11890 | Not Available | Negative | 2169568 - 2170530 | 35620.7 |
| serine/threonine protein phosphatase | DCW88_11895 | Not Available | Negative | 2170830 - 2171621 | 29392.8 |
| hypothetical protein | DCW88_11900 | Not Available | Negative | 2171831 - 2172436 | 21775.2 |
| hypothetical protein | DCW88_11905 | Not Available | Negative | 2172557 - 2172856 | 10667.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

