Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Botryococcus braunii, Glycine max, Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DCW88_11630 | Not Available | Positive | 2114768 - 2115739 | 34024.4 |
| cytidine deaminase | DCW88_11635 | Not Available | Positive | 2115723 - 2116160 | 15698.0 |
| purine-nucleoside phosphorylase | DCW88_11640 | Not Available | Positive | 2116160 - 2116960 | 27913.2 |
| deoxyribose-phosphate aldolase | DCW88_11645 | Not Available | Positive | 2116963 - 2117736 | 27446.1 |
| thymidine phosphorylase | DCW88_11650 | Not Available | Positive | 2117733 - 2119049 | 45274.0 |
| tigr02281 family clan aa aspartic protease | DCW88_11655 | Not Available | Negative | 2119042 - 2119563 | 18564.7 |
| uracil phosphoribosyltransferase | DCW88_11660 | Not Available | Negative | 2119695 - 2120059 | 13161.8 |
| ba14k family protein | DCW88_11665 | Not Available | Positive | 2120060 - 2120174 | 4449.08 |
| ba14k family protein | DCW88_11670 | Not Available | Positive | 2120389 - 2120904 | 19533.0 |
| transporter | DCW88_11675 | Not Available | Negative | 2120966 - 2121961 | 37587.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

