Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Botryococcus braunii, Glycine max, Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haloacid dehalogenase | DCW88_11330 | Not Available | Negative | 2059221 - 2061440 | 77801.0 |
| copper oxidase | DCW88_11335 | Not Available | Negative | 2061452 - 2061866 | 15426.7 |
| copper oxidase | DCW88_11340 | Not Available | Negative | 2062028 - 2062403 | 13392.0 |
| alkanesulfonate monooxygenase, fmnh(2)-dependent | DCW88_11345 | Not Available | Negative | 2062404 - 2063545 | 40817.3 |
| hypothetical protein | DCW88_11350 | Not Available | Negative | 2063714 - 2063911 | 7747.26 |
| serine hydrolase family protein | DCW88_11355 | Not Available | Negative | 2064100 - 2064702 | 21697.9 |
| hypothetical protein | DCW88_11360 | Not Available | Negative | 2064910 - 2065209 | 11063.5 |
| alkanesulfonate monooxygenase | DCW88_11365 | Not Available | Positive | 2065099 - 2065331 | 8323.6 |
| hypothetical protein | DCW88_11370 | Not Available | Negative | 2065335 - 2066075 | 27529.1 |
| hypothetical protein | DCW88_11375 | Not Available | Negative | 2066507 - 2066851 | 12378.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

