Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Botryococcus braunii, Glycine max, Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DCW88_11015 | Not Available | Positive | 2003643 - 2003878 | 8770.52 |
| hypothetical protein | DCW88_11020 | Not Available | Positive | 2004031 - 2004555 | 19400.4 |
| c factor | DCW88_11025 | Not Available | Positive | 2004570 - 2005268 | 24524.3 |
| hypothetical protein | DCW88_11030 | Not Available | Negative | 2005373 - 2006524 | 42405.4 |
| abc transporter atp-binding protein | DCW88_11035 | Not Available | Positive | 2006850 - 2007509 | 23478.4 |
| abc transporter permease | DCW88_11040 | Not Available | Positive | 2007506 - 2009914 | 87053.7 |
| iron abc transporter permease | DCW88_11045 | Not Available | Positive | 2009904 - 2010971 | 38946.9 |
| arac family transcriptional regulator | DCW88_11050 | Not Available | Negative | 2011040 - 2011207 | 6585.06 |
| arac family transcriptional regulator | DCW88_11055 | Not Available | Negative | 2011332 - 2012085 | 27114.6 |
| sdr family oxidoreductase | DCW88_11060 | Not Available | Positive | 2012222 - 2013016 | 27623.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

