Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Botryococcus braunii, Glycine max, Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-54 factor | DCW88_00290 | Not Available | Positive | 50520 - 52070 | 56796.1 |
| ribosome-associated translation inhibitor raia | DCW88_00295 | Not Available | Positive | 52305 - 52877 | 21069.8 |
| transcriptional regulator | DCW88_00300 | Not Available | Positive | 52960 - 53071 | 3945.96 |
| myo-inositol catabolism protein | DCW88_00305 | Not Available | Negative | 53072 - 53236 | 5875.6 |
| hypothetical protein | DCW88_00310 | Not Available | Negative | 53484 - 53822 | 12519.0 |
| hypothetical protein | DCW88_00315 | Not Available | Negative | 53959 - 54450 | 18804.3 |
| sarp family transcriptional regulator | DCW88_00320 | Not Available | Positive | 54637 - 56565 | 71732.6 |
| hypothetical protein | DCW88_00325 | Not Available | Positive | 56574 - 57002 | 14814.6 |
| hypothetical protein | DCW88_00330 | Not Available | Positive | 57040 - 58239 | 43205.5 |
| tfua-like core domain-containing protein | DCW88_00335 | Not Available | Positive | 58236 - 58952 | 24725.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

