Agrobacterium rhizogenes str. NCPPB2659

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Martinezella

Description

Agrobacterium rhizogenes str. NCPPB2659 is a Gram-negative, rod-shaped bacterium that thrives in terrestrial environments and exhibits aerobic metabolic characteristics. This strain has an optimal growth temperature of 25.0 °C, which suggests it is well-adapted to moderate environmental conditions typically found in soil ecosystems. As a member of the Agrobacterium genus, A. rhizogenes is recognized for its role in plant interactions, particularly in the transformation of plant cells. While specific pathogenicity traits are not detailed in the available data, the general behavior of Agrobacterium species indicates their potential involvement in plant-associated processes. The aerobic nature of A. rhizogenes str. NCPPB2659 points to its reliance on oxygen for survival and growth, which may influence its ecological niche within soil microbiomes. This adaptation allows it to compete effectively with other microorganisms in well-oxygenated soil environments. The presence of this strain in terrestrial habitats highlights its potential contributions to soil health and plant development, possibly through mechanisms such as nutrient cycling or symbiotic relationships. Understanding the traits of A. rhizogenes str. NCPPB2659 could provide insights into its ecological roles and potential applications in agriculture and biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusMartinezella
SpeciesMartinezella rhizogenes
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium rhizogenes str. NCPPB2659
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipNot Available
Host(s)Viridiplantae, Solanum lycopersicum, Justicia adhatoda
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium rhizogenes strain NCPPB2659 scaffold9.1, whole genome

Gene Summary

Adenine Count

1063871 bp

Thymine Count

1056632 bp

Guanine Count

1569985 bp

Cytosine Count

1586849 bp

Genome Length

5277347 bp

Protein-coding Genes

0 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinA8L48_RS02905Not AvailablePositive600180 - 60123838745.2
sugar kinaseA8L48_RS02910Not AvailablePositive601259 - 60221834169.0
p1 family peptidaseA8L48_RS02915Not AvailablePositive602363 - 60342136319.1
d-amino-acid transaminaseA8L48_RS02920Not AvailablePositive603442 - 60430831670.2
lysr substrate-binding domain-containing proteinA8L48_RS02925Not AvailableNegative604374 - 60527033360.9
serine hydrolase domain-containing proteinA8L48_RS02930Not AvailableNegative605358 - 60686954242.1
abc transporter atp-binding proteinA8L48_RS02935Not AvailableNegative607097 - 60783727173.9
abc transporter atp-binding proteinA8L48_RS02940Not AvailableNegative607834 - 60866430255.1
nickel transporter permeaseA8L48_RS02945Not AvailableNegative608668 - 60957032464.3
abc transporter permeaseA8L48_RS02950Not AvailableNegative609567 - 61058036581.8

Displaying genes 791 – 800 of 3006 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
HrdCausesPMC11575935
Crown and cane gall symptomsCausesPMC12602688
Crown and cane gallsCausesPMC12602688
Hairy root diseaseCausesPMC8087989
Hairy root diseaseCausesPMC8347015

Displaying health effects 1 – 5 of 5 in total