Agrobacterium tumefaciens str. 186

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens str. 186 is a rod-shaped, Gram-negative bacterium that thrives optimally at a temperature of 25.0°C. As an aerobe, this microbe requires oxygen for its metabolic processes, which is characteristic of its adaptability to various environmental conditions. A. tumefaciens is notably found in multiple habitats, indicating its ecological versatility and capacity to colonize diverse environments. This strain is part of a larger group of Agrobacterium species known for their role in plant interactions, particularly in the context of plant transformation. While the specific interactions of A. tumefaciens str. 186 with plant hosts are not detailed here, the genus is widely recognized for its ability to transfer genetic material to plants, facilitating the study of plant genetics and biotechnology applications. Given its broad habitat range and aerobic nature, A. tumefaciens str. 186 may serve as a model organism for understanding microbial ecology and interactions within various ecosystems. This adaptability underscores the potential for A. tumefaciens strains to contribute to soil health and nutrient cycling, which could be essential in agricultural settings. Thus, the ecological role of A. tumefaciens str. 186 may extend beyond plant transformation, highlighting its significance in promoting microbial diversity and interactions in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
Strain186

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens str. 186
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Viridiplantae, Triticum aestivum, Solanum tuberosum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens strain 186 chromosome Circular, complete

Gene Summary

Adenine Count

598269 bp

Thymine Count

590993 bp

Guanine Count

871384 bp

Cytosine Count

883270 bp

Genome Length

2943916 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
azld family proteinCG010_RS03615Not AvailablePositive738499 - 7388019965.92
replicative dna helicaseCG010_RS03620Not AvailableNegative738901 - 74039755056.4
marr family winged helix-turn-helix transcriptional regulatorCG010_RS03625Not AvailablePositive740710 - 74116516937.2
mfs transporterCG010_RS03630Not AvailablePositive741162 - 74291063009.9
hlyd family secretion proteinCG010_RS03635Not AvailablePositive742930 - 74399737812.0
50s ribosomal protein l9CG010_RS03640Not AvailableNegative744262 - 74483721034.6
duf2232 domain-containing proteinCG010_RS03645Not AvailableNegative744852 - 74582634527.4
30s ribosomal protein s18CG010_RS03650Not AvailableNegative746012 - 7462609370.5
30s ribosomal protein s6CG010_RS03655Not AvailableNegative746277 - 74673817755.0
clbs/dfsb family four-helix bundle proteinCG010_RS03660Not AvailableNegative747012 - 74752419319.1

Displaying genes 771 – 780 of 5441 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
TumorsCausesPMC177831
Crown gall diseaseCausesPMC2241609
Crown gall diseaseCausesPMC2653234
Crown gall diseaseCausesPMC11575935
Crown and cane gall symptomsCausesPMC12602688
Crown and cane gallsCausesPMC12602688
Crown gall diseaseCausesPMC9343901
Crown gallCausesPMC12030312
Crown-gall diseaseCausesPMC7248198
Crown gall tumorsCausesPMC8087989

Displaying health effects 1 – 10 of 11 in total