Burkholderia glumae

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia glumae is a Gram-negative, rod-shaped bacterium that exhibits motility through the presence of flagella. As a facultative anaerobe, it can thrive in both aerobic and anaerobic environments, and it demonstrates a chemoheterotrophic mode of nutrition, deriving energy from organic compounds. This mesophilic organism has an optimal growth temperature of approximately 30.0°C, indicating its preference for moderate thermal conditions. Burkholderia glumae is primarily found in soil, where it exists as a free-living entity. It is notable for its pathogenicity in plants, which suggests a potential role in agricultural contexts, possibly affecting crop health and productivity. The bacterium does not form spores, which may influence its survival strategies in the soil environment. Genetically, Burkholderia glumae possesses one replicon, and its genome is cataloged under the accession NJFN00000000.2. This genetic information may aid in further studies aimed at understanding its biological functions and interactions within its habitat. Overall, Burkholderia glumae's ability to thrive in diverse soil conditions and its potential impact on plant health highlight its ecological significance, particularly in agricultural systems where soil microbiota can influence crop outcomes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia glumae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Burkholderia glumae
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipFree living
Host(s)Homo sapiens, Solanum lycopersicum, Oryza sativa
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityPlant

Genome Summary

Burkholderia glumae strain FDAARGOS_346

Gene Summary

Adenine Count

1093648 bp

Thymine Count

1096372 bp

Guanine Count

2339853 bp

Cytosine Count

2344424 bp

Genome Length

6874297 bp

Protein-coding Genes

5527 genes

Non-Coding Genes

316 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hrpe/yscl family type iii secretion apparatus proteinCEQ24_003105Not AvailableNegative737971 - 73901736934.7
type iii secretion proteinCEQ24_003110Not AvailableNegative739002 - 73974225599.7
escj/yscj/hrcj family type iii secretion inner membrane ring proteinCEQ24_003115Not AvailableNegative739762 - 74060429678.8
type iii secretion protein hrpb2CEQ24_003120Not AvailableNegative740653 - 74103913620.2
hrpb1 family type iii secretion system apparatus proteinCEQ24_003125Not AvailableNegative741071 - 74165521009.2
escu/yscu/hrcu family type iii secretion system export apparatus switch proteinCEQ24_003130Not AvailablePositive742106 - 74316438211.4
escv/yscv/hrcv family type iii secretion system export apparatus proteinCEQ24_003135Not AvailablePositive743186 - 74529175277.2
type iii secretion proteinCEQ24_003140Not AvailablePositive745288 - 74595324106.6
yscq/hrcq family type iii secretion apparatus proteinCEQ24_003145Not AvailablePositive745947 - 74728445514.6
escr/yscr/hrcr family type iii secretion system export apparatus proteinCEQ24_003150Not AvailablePositive747268 - 74791823663.7

Displaying genes 881 – 890 of 5843 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm00152703-(L-alanyl-L-homoserinyl-L-aspartyl-βcarboxy)-4-hydroxy-5-oxopyrazoleC14H21N5O9Chemical structure of 3-(L-alanyl-L-homoserinyl-L-aspartyl-βcarboxy)-4-hydroxy-5-oxopyrazoleNULL
Average403.348Da
Monoisotopic403.133927276Da
BASm0015828L-alanyl-L-homoserinyl-L-aspartic acidC11H19N3O7Chemical structure of L-alanyl-L-homoserinyl-L-aspartic acidNULL
Average305.287Da
Monoisotopic305.122299964Da

Displaying 1–2 of 2 metabolites

Health Effects

Health ConditionRelationReference
Bacterial seedling rotCausesPMC11524443
Bacterial panicle blightCausesPMC11524443
Seedling rotCausesPMC11524443
Gladiolus rotCausesPMC11524443
ScabCausesPMC11524443
Grain rotCausesPMC11524443
RotCausesPMC11898562
WiltCausesPMC11898562
BlightCausesPMC11898562
Rice seedling rotCausesPMC11898562

Displaying health effects 1 – 10 of 16 in total