Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(fad)-dependent dehydrogenase | AFK24_23515 | Not Available | Positive | 5256297 - 5256602 | 10918.2 |
| (2fe-2s)-binding protein | AFK24_23520 | Not Available | Positive | 5256587 - 5257975 | 49287.5 |
| sarcosine oxidase subunit beta | AFK24_23525 | Not Available | Positive | 5257972 - 5259141 | 42369.0 |
| acetylornithine deacetylase | AFK24_23530 | Not Available | Positive | 5259141 - 5260298 | 41601.2 |
| tonb-dependent receptor | AFK24_23535 | Not Available | Negative | 5260311 - 5262428 | 77630.8 |
| hypothetical protein | AFK24_23545 | Not Available | Negative | 5262814 - 5263137 | 12401.9 |
| alcohol dehydrogenase | AFK24_23550 | Not Available | Negative | 5263194 - 5264342 | 39980.3 |
| hypothetical protein | AFK24_23555 | Not Available | Negative | 5264477 - 5264974 | 18518.1 |
| methyltransferase | AFK24_23560 | Not Available | Negative | 5265160 - 5266377 | 45269.0 |
| hypothetical protein | AFK24_23565 | Not Available | Negative | 5266492 - 5267406 | 36294.1 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









