Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFK24_23465 | Not Available | Negative | 5241628 - 5242491 | 30033.1 |
| aldehyde dehydrogenase | AFK24_23470 | Not Available | Positive | 5242745 - 5244223 | 52241.7 |
| hydantoinase | AFK24_23475 | Not Available | Positive | 5244407 - 5246458 | 72970.3 |
| hydantoin utilization protein b | AFK24_23480 | Not Available | Positive | 5246462 - 5248465 | 72373.4 |
| dehalogenase | AFK24_23485 | Not Available | Positive | 5248822 - 5249490 | 25153.0 |
| fad-dependent oxidoreductase | AFK24_23490 | Not Available | Positive | 5249517 - 5250794 | 46042.1 |
| abc transporter substrate-binding protein | AFK24_23495 | Not Available | Positive | 5250901 - 5252538 | 59246.0 |
| abc transporter permease | AFK24_23500 | Not Available | Positive | 5252575 - 5253531 | 34296.4 |
| dna-directed rna polymerase subunit alpha | AFK24_23505 | Not Available | Positive | 5253528 - 5254457 | 33368.6 |
| hypothetical protein | AFK24_23510 | Not Available | Positive | 5254459 - 5256300 | 66315.4 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









