Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | AFK24_22895 | Not Available | Positive | 5119994 - 5120650 | 23927.9 |
| hypothetical protein | AFK24_22900 | Not Available | Negative | 5120754 - 5120969 | 7306.73 |
| deoxycytidine triphosphate deaminase | AFK24_22905 | Not Available | Negative | 5121093 - 5121659 | 21210.3 |
| cold-shock protein | AFK24_22910 | Not Available | Positive | 5121969 - 5122178 | 7727.11 |
| atp-binding protein | AFK24_22915 | Not Available | Negative | 5122326 - 5123420 | 38612.8 |
| methionine--trna ligase | AFK24_22920 | Not Available | Positive | 5123596 - 5125644 | 75607.2 |
| nadh:quinone oxidoreductase | AFK24_22925 | Not Available | Positive | 5125834 - 5126421 | 20872.4 |
| (4fe-4s)-binding protein | AFK24_22930 | Not Available | Positive | 5126418 - 5127461 | 37221.0 |
| electron transporter rnfd | AFK24_22935 | Not Available | Positive | 5127508 - 5128467 | 33859.5 |
| hypothetical protein | AFK24_22940 | Not Available | Positive | 5128464 - 5129084 | 22074.8 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









