Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | AFK24_22735 | Not Available | Positive | 5083574 - 5084668 | 40032.7 |
| transporter | AFK24_22740 | Not Available | Positive | 5084724 - 5085866 | 42615.6 |
| spermidine/putrescine abc transporter permease | AFK24_22745 | Not Available | Positive | 5085863 - 5086783 | 34202.1 |
| spermidine/putrescine abc transporter permease | AFK24_22750 | Not Available | Positive | 5086780 - 5087664 | 32171.3 |
| transporter | AFK24_22755 | Not Available | Negative | 5087960 - 5089369 | 50553.4 |
| multidrug transporter | AFK24_22760 | Not Available | Negative | 5089366 - 5092503 | 110994.0 |
| hemolysin d | AFK24_22765 | Not Available | Negative | 5092507 - 5093703 | 41724.9 |
| histidine kinase | AFK24_22770 | Not Available | Positive | 5093840 - 5095228 | 50991.6 |
| transcriptional regulator | AFK24_22775 | Not Available | Positive | 5095231 - 5095896 | 24768.4 |
| collagen pro alpha-chain precursor | AFK24_22780 | Not Available | Negative | 5096090 - 5096848 | 25241.2 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









