Pseudomonas syringae str. GR12-2

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae str. GR12-2 is a Gram-negative, rod-shaped bacterium that exists as single cells and is classified as a heterotroph, utilizing organic compounds as its energy source. This strain thrives in various habitats, showcasing its ecological versatility, and it is obligately aerobic, requiring oxygen for growth and metabolism. The ability of Pseudomonas syringae str. GR12-2 to adapt to multiple environments suggests a robust metabolic flexibility, which is a characteristic feature of the Pseudomonas genus. This adaptability may allow the bacterium to exploit a range of organic substrates, contributing to its survival in diverse ecological niches. As an aerobic organism, this strain may play a role in the cycling of nutrients in its habitats, potentially influencing microbial community dynamics and overall ecosystem function. Further exploration of Pseudomonas syringae str. GR12-2's metabolic pathways and ecological interactions could provide insights into its role in biogeochemical cycles and its potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
StrainGR12-2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae str. GR12-2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Viridiplantae
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityPlant

Genome Summary

Pseudomonas syringae strain GR12-2 00001.scaffold2.1_1, whole

Gene Summary

Adenine Count

1359577 bp

Thymine Count

1374865 bp

Guanine Count

1943739 bp

Cytosine Count

1923132 bp

Genome Length

6601350 bp

Protein-coding Genes

5666 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cell envelope biogenesis protein asmaAFK24_22580Not AvailableNegative5051171 - 505339079703.7
acetyltransferaseAFK24_22585Not AvailableNegative5053469 - 505389715647.8
mfs transporterAFK24_22590Not AvailablePositive5054151 - 505581258996.0
imidazoleglycerol-phosphate dehydrataseAFK24_22595Not AvailablePositive5056073 - 505666621942.3
imidazole glycerol phosphate synthaseAFK24_22600Not AvailablePositive5056666 - 505730423548.9
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomeraseAFK24_22605Not AvailablePositive5057310 - 505757010062.0
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomeraseAFK24_22610Not AvailablePositive5057696 - 505843325926.4
imidazole glycerol phosphate synthaseAFK24_22615Not AvailablePositive5058527 - 505929727298.8
amino acid abc transporter substrate-binding proteinAFK24_22620Not AvailablePositive5059498 - 506027428398.3
polysaccharide deacetylaseAFK24_22625Not AvailableNegative5060409 - 506120328844.2

Displaying genes 4391 – 4400 of 5740 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
ChlorosisCausesPMC3202874
NecrosisCausesPMC3202874
Foliar necroses and cankersCausesPMC6638699
Bacterial cankerCausesPMC8815115
BlightCausesPMC12030312
Plant diseasesCausesPMC3029378
Bacterial cankerCausesPMC4803819
Cherry cankerCausesPMC9305585

Displaying health effects 1 – 8 of 8 in total