Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome o ubiquinol oxidase subunit i | AFK24_22360 | Not Available | Positive | 5013578 - 5015590 | 74338.7 |
| cytochrome o ubiquinol oxidase subunit iii | AFK24_22365 | Not Available | Positive | 5015593 - 5016213 | 22526.6 |
| cytochrome c oxidase | AFK24_22370 | Not Available | Positive | 5016213 - 5016545 | 12367.6 |
| protoheme ix farnesyltransferase | AFK24_22375 | Not Available | Positive | 5016556 - 5017443 | 32275.7 |
| glycosyl transferase | AFK24_22380 | Not Available | Positive | 5017781 - 5018683 | 33756.5 |
| glyoxalase | AFK24_22390 | Not Available | Negative | 5019235 - 5019660 | 16027.8 |
| lysr family transcriptional regulator | AFK24_22395 | Not Available | Positive | 5019770 - 5020666 | 33194.8 |
| branched-chain amino acid aminotransferase | AFK24_22400 | Not Available | Positive | 5020776 - 5021795 | 37081.2 |
| arti protein | AFK24_22405 | Not Available | Negative | 5021890 - 5022681 | 29311.4 |
| lipoprotein | AFK24_22410 | Not Available | Negative | 5022735 - 5023076 | 12326.9 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









