Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFK24_21840 | Not Available | Negative | 4891454 - 4892071 | 22871.2 |
| choline dehydrogenase | AFK24_21845 | Not Available | Negative | 4892371 - 4894005 | 59784.1 |
| sorbitol dehydrogenase | AFK24_21850 | Not Available | Negative | 4894002 - 4894556 | 19738.7 |
| cytochrome c | AFK24_21855 | Not Available | Negative | 4894561 - 4895904 | 47614.5 |
| glutamate carboxypeptidase | AFK24_21860 | Not Available | Negative | 4896532 - 4897788 | 43849.6 |
| Trna-arg | Not Available | Not Available | Positive | 4897972 - 4898048 | Not Available |
| succinate-semialdehyde dehydrogenase | AFK24_21870 | Not Available | Positive | 4898387 - 4899829 | 51734.2 |
| 4-aminobutyrate aminotransferase | AFK24_21875 | Not Available | Positive | 4899968 - 4901248 | 44991.8 |
| histidine kinase | AFK24_21880 | Not Available | Positive | 4901408 - 4902781 | 49475.8 |
| diguanylate cyclase | AFK24_21885 | Not Available | Negative | 4902889 - 4903881 | 36994.7 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









