Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter atpase | AFK24_21740 | Not Available | Positive | 4869183 - 4871378 | 76901.7 |
| transcriptional regulator | AFK24_21745 | Not Available | Positive | 4871375 - 4871776 | 14805.6 |
| gntr family transcriptional regulator | AFK24_21750 | Not Available | Negative | 4871999 - 4872736 | 27962.0 |
| periplasmic protein | AFK24_21755 | Not Available | Positive | 4872967 - 4873662 | 25834.8 |
| deor family transcriptional regulator | AFK24_21760 | Not Available | Positive | 4873686 - 4875632 | 71286.2 |
| mfs transporter | AFK24_21765 | Not Available | Negative | 4875633 - 4876838 | 43457.2 |
| lysr family transcriptional regulator | AFK24_21770 | Not Available | Positive | 4876941 - 4877900 | 35158.3 |
| hypothetical protein | AFK24_21775 | Not Available | Negative | 4878010 - 4878339 | 11755.3 |
| thiamine pyrophosphate-binding protein | AFK24_21780 | Not Available | Negative | 4878336 - 4878896 | 20460.7 |
| peptidase | AFK24_21785 | Not Available | Negative | 4878893 - 4880086 | 44672.8 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









