Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | AFK24_21640 | Not Available | Positive | 4848236 - 4849156 | 34033.0 |
| xanthine permease xanp | AFK24_21645 | Not Available | Positive | 4849321 - 4850712 | 48530.9 |
| tetr family transcriptional regulator | AFK24_21650 | Not Available | Positive | 4850813 - 4851475 | 24790.6 |
| thymidylate synthase | AFK24_21655 | Not Available | Positive | 4851511 - 4852101 | 21406.7 |
| hypothetical protein | AFK24_21660 | Not Available | Negative | 4852448 - 4852693 | 9330.52 |
| abc transporter | AFK24_21665 | Not Available | Positive | 4852748 - 4854316 | 55632.4 |
| sugar abc transporter permease | AFK24_21670 | Not Available | Positive | 4854328 - 4855428 | 39480.0 |
| abc transporter permease | AFK24_21675 | Not Available | Positive | 4855428 - 4856354 | 32553.3 |
| short-chain dehydrogenase | AFK24_21680 | Not Available | Positive | 4856440 - 4857126 | 24399.4 |
| 8-oxoguanine deaminase | AFK24_21685 | Not Available | Positive | 4857436 - 4858791 | 48913.9 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









