Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | AFK24_21230 | Not Available | Negative | 4763801 - 4764709 | 33005.6 |
| mfs transporter | AFK24_21235 | Not Available | Positive | 4764820 - 4766016 | 41125.6 |
| histidine kinase | AFK24_21240 | Not Available | Positive | 4766180 - 4767271 | 39600.0 |
| hypothetical protein | AFK24_21245 | Not Available | Negative | 4767446 - 4768162 | 27127.2 |
| glyoxalase | AFK24_21250 | Not Available | Negative | 4768776 - 4769240 | 16933.0 |
| ketosteroid isomerase | AFK24_21255 | Not Available | Negative | 4769274 - 4769726 | 16776.9 |
| dehydrogenase | AFK24_21260 | Not Available | Negative | 4769751 - 4770122 | 13515.0 |
| rna polymerase subunit sigma-24 | AFK24_21265 | Not Available | Negative | 4770238 - 4771506 | 47421.7 |
| mfs transporter | AFK24_21270 | Not Available | Negative | 4771593 - 4772903 | 47225.6 |
| oxidoreductase | AFK24_21275 | Not Available | Negative | 4773040 - 4773915 | 30268.0 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









