Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFK24_21180 | Not Available | Negative | 4751502 - 4752560 | 40238.3 |
| hypothetical protein | AFK24_21185 | Not Available | Negative | 4752560 - 4753144 | 22042.4 |
| hypothetical protein | AFK24_21190 | Not Available | Positive | 4754913 - 4755122 | 7590.3 |
| histidine kinase | AFK24_21195 | Not Available | Negative | 4755328 - 4756401 | 39770.3 |
| histidine kinase | AFK24_21200 | Not Available | Negative | 4756401 - 4758593 | 81278.9 |
| phage antirepressor protein | AFK24_21205 | Not Available | Positive | 4759117 - 4759686 | 22200.6 |
| hypothetical protein | AFK24_21210 | Not Available | Positive | 4760535 - 4760849 | 11403.0 |
| hypothetical protein | AFK24_21215 | Not Available | Positive | 4761173 - 4762198 | 39154.0 |
| hypothetical protein | AFK24_21220 | Not Available | Positive | 4762315 - 4762905 | 20986.7 |
| lysine transporter lyse | AFK24_21225 | Not Available | Negative | 4763044 - 4763682 | 22807.8 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









