Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | AFK24_21065 | Not Available | Positive | 4725941 - 4726606 | 24809.8 |
| amino acid abc transporter | AFK24_21070 | Not Available | Positive | 4726619 - 4727269 | 23853.1 |
| glutamine abc transporter atp-binding protein | AFK24_21075 | Not Available | Positive | 4727262 - 4727984 | 26151.9 |
| hypothetical protein | AFK24_21080 | Not Available | Positive | 4728000 - 4729037 | 37051.5 |
| dihydrodipicolinate synthase | AFK24_21085 | Not Available | Positive | 4729204 - 4730121 | 32650.4 |
| trna 2-thiocytidine biosynthesis protein ttca | AFK24_21090 | Not Available | Negative | 4730239 - 4731063 | 31207.8 |
| membrane protein | AFK24_21095 | Not Available | Positive | 4731401 - 4732003 | 21823.0 |
| sprt | AFK24_21100 | Not Available | Positive | 4732196 - 4732690 | 19412.4 |
| c4-dicarboxylate transporter | AFK24_21110 | Not Available | Negative | 4734090 - 4735448 | 47914.2 |
| histidine kinase | AFK24_21115 | Not Available | Negative | 4735843 - 4737180 | 49616.1 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









