Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma-24 | AFK24_20965 | Not Available | Negative | 4702595 - 4703113 | 19305.3 |
| glyceraldehyde-3-phosphate dehydrogenase | AFK24_20970 | Not Available | Negative | 4703368 - 4704369 | 36276.3 |
| phosphogluconate dehydratase | AFK24_20975 | Not Available | Positive | 4704589 - 4706415 | 65614.2 |
| glucokinase | AFK24_20980 | Not Available | Positive | 4706412 - 4707392 | 34786.0 |
| chemotaxis protein chey | AFK24_20985 | Not Available | Positive | 4707551 - 4708288 | 27738.3 |
| histidine kinase | AFK24_20990 | Not Available | Positive | 4708364 - 4709770 | 52258.2 |
| nad(fad)-utilizing dehydrogenase | AFK24_20995 | Not Available | Negative | 4709992 - 4711239 | 44134.5 |
| histone deacetylase superfamily protein | AFK24_21000 | Not Available | Negative | 4711561 - 4712478 | 34115.7 |
| gnat family acetyltransferase | AFK24_21005 | Not Available | Positive | 4712612 - 4713181 | 21269.8 |
| palmitoyl-coa hydrolase | AFK24_21010 | Not Available | Positive | 4713264 - 4714133 | 32663.7 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









