Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-succinylarginine dihydrolase | AFK24_20505 | Not Available | Positive | 4596667 - 4598013 | 48658.8 |
| topoisomerase ii | AFK24_20510 | Not Available | Positive | 4598079 - 4598369 | 10707.5 |
| succinylglutamate desuccinylase | AFK24_20515 | Not Available | Positive | 4598382 - 4599389 | 37744.2 |
| transporter | AFK24_20520 | Not Available | Negative | 4599807 - 4602164 | 85399.1 |
| membrane protein | AFK24_20525 | Not Available | Negative | 4602374 - 4603351 | 35784.9 |
| rna polymerase sigma factor | AFK24_20530 | Not Available | Negative | 4603348 - 4603851 | 18932.1 |
| hypothetical protein | AFK24_20535 | Not Available | Positive | 4604171 - 4604449 | 9958.66 |
| peptidase | AFK24_20540 | Not Available | Positive | 4604470 - 4606053 | 58265.2 |
| membrane protein | AFK24_20545 | Not Available | Positive | 4606053 - 4606385 | 11594.9 |
| arac family transcriptional regulator | AFK24_20550 | Not Available | Negative | 4606398 - 4607267 | 32275.4 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









