Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase or acyltransferase | AFK24_11420 | Not Available | Positive | 2539294 - 2540289 | 35577.1 |
| fad-dependent cmnm(5)s(2)u34 oxidoreductase | AFK24_11425 | Not Available | Negative | 2540584 - 2542560 | 72155.0 |
| hypothetical protein | AFK24_11430 | Not Available | Positive | 2542678 - 2547429 | 176692.0 |
| polyphosphate kinase | AFK24_11435 | Not Available | Positive | 2547563 - 2549059 | 57793.1 |
| hemolysin secretion protein d | AFK24_11440 | Not Available | Negative | 2549537 - 2550886 | 49825.9 |
| abc transporter | AFK24_11445 | Not Available | Negative | 2550899 - 2553055 | 78491.4 |
| channel protein tolc | AFK24_11450 | Not Available | Negative | 2553080 - 2554435 | 50544.3 |
| vcbs protein | AFK24_11455 | Not Available | Positive | 2554854 - 2558453 | 121668.0 |
| membrane protein | AFK24_11460 | Not Available | Negative | 2558626 - 2559021 | 14893.6 |
| hypothetical protein | AFK24_11465 | Not Available | Negative | 2559032 - 2559619 | 22071.8 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









