Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell envelope biogenesis protein ompa | AFK24_10855 | Not Available | Negative | 2419072 - 2419776 | 24319.5 |
| beta-lactamase | AFK24_10860 | Not Available | Negative | 2419875 - 2420519 | 23740.5 |
| galactose 1-dehydrogenase | AFK24_10865 | Not Available | Negative | 2420578 - 2421504 | 33641.0 |
| metal-dependent phosphohydrolase | AFK24_10870 | Not Available | Positive | 2421909 - 2423111 | 44775.5 |
| luxr family transcriptional regulator | AFK24_10875 | Not Available | Negative | 2423234 - 2425969 | 101909.0 |
| hypothetical protein | AFK24_10880 | Not Available | Negative | 2426248 - 2427612 | 50641.9 |
| type v secretory pathway, adhesin aida | AFK24_10885 | Not Available | Negative | 2427640 - 2429577 | 69841.9 |
| long-chain fatty acid--coa ligase | AFK24_10890 | Not Available | Negative | 2429939 - 2431615 | 62165.8 |
| lysine transporter lyse | AFK24_10895 | Not Available | Negative | 2431932 - 2432561 | 22499.8 |
| glycerate dehydrogenase | AFK24_10900 | Not Available | Positive | 2432649 - 2433611 | 34293.6 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









