Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFK24_10755 | Not Available | Positive | 2400440 - 2401045 | 23340.9 |
| merr family transcriptional regulator | AFK24_10760 | Not Available | Negative | 2401076 - 2402038 | 35907.5 |
| antibiotic biosynthesis monooxygenase | AFK24_10765 | Not Available | Positive | 2402274 - 2402840 | 21189.6 |
| dihydrofolate reductase | AFK24_10770 | Not Available | Positive | 2403077 - 2403787 | 25667.0 |
| gtp cyclohydrolase | AFK24_10775 | Not Available | Positive | 2403809 - 2404372 | 20835.4 |
| d-erythro-7,8-dihydroneopterin triphosphate epimerase | AFK24_10780 | Not Available | Positive | 2404372 - 2404743 | 13946.9 |
| cell division protein dedd | AFK24_10785 | Not Available | Positive | 2404787 - 2405083 | 11358.3 |
| hopj type iii effector protein | AFK24_10790 | Not Available | Positive | 2405076 - 2405417 | 11884.0 |
| thioredoxin reductase | AFK24_10795 | Not Available | Negative | 2405509 - 2406471 | 33799.2 |
| alkyl hydroperoxide reductase | AFK24_10800 | Not Available | Negative | 2406612 - 2407211 | 21849.0 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









